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1

ModellingDictyostelium discoideummorphogenesis: The culmination

Athanasius F.M. Marée, Paulien Hogeweg

Journal:

Bulletin of Mathematical Biology

Year:

2002

Language:

english

File:

PDF, 2.22 MB

english, 2002

2

Migration and Thermotaxis of Dictyostelium discoideum Slugs, a Model Study

Athanasius F.M Marée, Alexander V Panfilov, Paulien Hogeweg

Journal:

Journal of Theoretical Biology

Year:

1999

Language:

english

File:

PDF, 363 KB

english, 1999

3

Quantifying macrophage defects in type 1 diabetes

Athanasius F.M. Marée, Mitsuhiro Komba, Cheryl Dyck, Marek Łabęcki, Diane T. Finegood, Leah Edelstein-Keshet

Journal:

Journal of Theoretical Biology

Year:

2005

Language:

english

File:

PDF, 557 KB

english, 2005

4

Polarization and Movement of Keratocytes: A Multiscale Modelling Approach

Athanasius F. M. Marée, Alexandra Jilkine, Adriana Dawes, Verônica A. Grieneisen, Leah Edelstein-Keshet

Journal:

Bulletin of Mathematical Biology

Year:

2006

Language:

english

File:

PDF, 1.25 MB

english, 2006

5

Mathematical Model for Spatial Segregation of the Rho-Family GTPases Based on Inhibitory Crosstalk

Alexandra Jilkine, Athanasius F. M. Marée, Leah Edelstein-Keshet

Journal:

Bulletin of Mathematical Biology

Year:

2007

Language:

english

File:

PDF, 991 KB

english, 2007

6

Auxin transport is sufficient to generate a maximum and gradient guiding root growth

Grieneisen, Verônica A., Xu, Jian, Marée, Athanasius F. M., Hogeweg, Paulien, Scheres, Ben

Journal:

Year:

2007

Language:

english

File:

PDF, 1.56 MB

english, 2007

7

Prevention of diabetes by manipulation of anti-IGRP autoimmunity: high efficiency of a low-affinity peptide

Han, Bingye, Serra, Pau, Amrani, Abdelaziz, Yamanouchi, Jun, Marée, Athanasius F M, Edelstein-Keshet, Leah, Santamaria, Pere

Journal:

Nature Medicine

Year:

2005

Language:

english

File:

PDF, 746 KB

english, 2005

8

Analysing immune cell migration

Beltman, Joost B., Marée, Athanasius F. M., de Boer, Rob J.

Journal:

Nature Reviews Immunology

Year:

2009

Language:

english

File:

PDF, 343 KB

english, 2009

9

Spatial modelling of brief and long interactions between T cells and dendritic cells

Beltman, Joost B, Marée, Athanasius F M, de Boer, Rob J

Journal:

Immunology & Cell Biology

Year:

2007

Language:

english

File:

PDF, 537 KB

english, 2007

10

Towards estimating the true duration of dendritic cell interactions with T cells

Joost B. Beltman, Sarah E. Henrickson, Ulrich H. von Andrian, Rob J. de Boer, Athanasius F.M. Marée

Journal:

Journal of Immunological Methods

Year:

2009

Language:

english

File:

PDF, 966 KB

english, 2009

11

Responses of Complex Cells in Area 17 of the Cat to Bi-vectorial Transparent Motion

RICHARD J.A van WEZEL, MARTIN J.M LANKHEET, FRANS A.J VERSTRATEN, ATHANASIUS F.M MARÉE, WIM A van de GRIND

Journal:

Vision Research

Year:

1996

Language:

english

File:

PDF, 980 KB

english, 1996

12

Ethylene-induced differential petiole growth in Arabidopsis thaliana involves local microtubule reorientation and cell expansion

Joanna K. Polko, Martijn van Zanten, Jop A. van Rooij, Athanasius F. M. Marée, Laurentius A. C. J. Voesenek, Anton J. M. Peeters, Ronald Pierik

Journal:

New Phytologist

Year:

2012

Language:

english

File:

PDF, 740 KB

english, 2012

13

Deterministic Versus Stochastic Cell Polarisation Through Wave-Pinning

Georg R. Walther, Athanasius F. M. Marée, Leah Edelstein-Keshet, Verônica A. Grieneisen

Journal:

Bulletin of Mathematical Biology

Year:

2012

Language:

english

File:

PDF, 1.22 MB

english, 2012

14

Morphogengineering roots: comparing mechanisms of morphogen gradient formation

Verônica A Grieneisen, Ben Scheres, Paulien Hogeweg, Athanasius F M Marée

Journal:

BMC Systems Biology

Year:

2012

Language:

english

File:

PDF, 2.05 MB

english, 2012

15

A General Functional Response of Cytotoxic T Lymphocyte-Mediated Killing of Target Cells

Gadhamsetty, Saikrishna, Marée, Athanasius F.M., Beltman, Joost B., de Boer, Rob J.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 1.45 MB

english, 2014

16

Phototaxis during the Slug Stage of Dictyostelium discoideum: A Model Study

Athanasius F. M. Maree, Alexander V. Panfilov and Paulien Hogeweg

Journal:

Proceedings Biological Sciences

Year:

1999

Language:

english

File:

PDF, 2.30 MB

english, 1999

17

Juicy Stories on Female Reproductive Tissue Development: Coordinating the Hormone Flows

Grieneisen, Verônica A., Marée, Athanasius F.M., Østergaard, Lars

Journal:

Journal of Integrative Plant Biology

Year:

2013

Language:

english

File:

PDF, 2.05 MB

english, 2013

18

How Cells Integrate Complex Stimuli: The Effect of Feedback from Phosphoinositides and Cell Shape on Cell Polarization and Motility

Marée, Athanasius F. M., Grieneisen, Verônica A., Edelstein-Keshet, Leah, McCulloch, Andrew D.

Journal:

PLoS Computational Biology

Year:

2012

Language:

english

File:

PDF, 1.40 MB

english, 2012

19

The RNA Silencing Pathway: The Bits and Pieces That Matter

Groenenboom, Marian A. C., Marée, Athanasius F. M., Hogeweg, Paulien

Journal:

PLoS Computational Biology

Year:

2005

Language:

english

File:

PDF, 381 KB

english, 2005

20

Moving Forward Moving Backward: Directional Sorting of Chemotactic Cells due to Size and Adhesion Differences

Käfer, Jos, Hogeweg, Paulien, Marée, Athanasius F. M.

Journal:

PLoS Computational Biology

Year:

2006

Language:

english

File:

PDF, 445 KB

english, 2006

21

Chemotactic Migration of T Cells towards Dendritic Cells Promotes the Detection of Rare Antigens

Vroomans, Renske M. A., Marée, Athanasius F. M., de Boer, Rob J., Beltman, Joost B., Haugh, Jason M.

Journal:

PLoS Computational Biology

Year:

2012

Language:

english

File:

PDF, 2.24 MB

english, 2012

22

The biophysical nature of cells: potential cell behaviours revealed by analytical and computational studies of cell surface mechanics

Magno, Ramiro, Grieneisen, Verônica A, Marée, Athanasius FM

Journal:

Year:

2015

Language:

english

File:

PDF, 3.31 MB

english, 2015

23

Small Variations in Multiple Parameters Account for Wide Variations in HIV-1 Set-Points: A Novel Modelling Approach

Viktor Müller, Athanasius F. M. Marée and Rob J. De Boer

Journal:

Proceedings Biological Sciences

Year:

2001

Language:

english

File:

PDF, 1.29 MB

english, 2001

24

A Sigmoid Functional Response Emerges When Cytotoxic T Lymphocytes Start Killing Fresh Target Cells

Gadhamsetty, Saikrishna, Marée, Athanasius F.M., Beltman, Joost B., de Boer, Rob J.

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 1.36 MB

english, 2017

25

Auxin minimum triggers the developmental switch from cell division to cell differentiation in the Arabidopsis root

Di Mambro, Riccardo, De Ruvo, Micol, Pacifici, Elena, Salvi, Elena, Sozzani, Rosangela, Benfey, Philip N., Busch, Wolfgang, Novak, Ondrej, Ljung, Karin, Di Paola, Luisa, Marée, Athanasius F. M., Costa

Journal:

Proceedings of the National Academy of Sciences

Year:

2017

Language:

english

File:

PDF, 2.65 MB

english, 2017

26

Morphometrics of complex cell shapes: Lobe Contribution Elliptic Fourier Analysis (LOCO-EFA)

Sánchez-Corrales, Yara E., Hartley, Matthew, van Rooij, Jop, Marée, Athanasius F. M., Grieneisen, Verônica A.

Journal:

Development (The Company of Biologists)

Year:

2018

Language:

english

File:

PDF, 5.01 MB

english, 2018

27

A multi-layered mechanistic modelling approach to understand how effector genes extend beyond phytoplasma to modulate plant hosts, insect vectors and the environment

Tomkins, Melissa, Kliot, Adi, Marée, Athanasius FM, Hogenhout, Saskia A

Journal:

Current Opinion in Plant Biology

Year:

2018

Language:

english

File:

PDF, 2.07 MB

english, 2018

28

Parsimonious Model of Vascular Patterning Links Transverse Hormone Fluxes to Lateral Root Initiation: Auxin Leads the Way, while Cytokinin Levels Out

el-Showk, Sedeer, Help-Rinta-Rahko, Hanna, Blomster, Tiina, Siligato, Riccardo, Marée, Athanasius F. M., Mähönen, Ari Pekka, Grieneisen, Verônica A., Beeckman, Tom

Journal:

PLoS Computational Biology

Year:

2015

Language:

english

File:

PDF, 24.02 MB

english, 2015

29

Tissue Dimensionality Influences the Functional Response of Cytotoxic T Lymphocyte-Mediated Killing of Targets

Gadhamsetty, Saikrishna, Marée, Athanasius F. M., de Boer, Rob J., Beltman, Joost B.

Journal:

Frontiers in Immunology

Year:

2017

Language:

english

File:

PDF, 541 KB

english, 2017

30

Spatiotemporal coordination of cell division and growth during organ morphogenesis

Fox, Samantha, Southam, Paul, Pantin, Florent, Kennaway, Richard, Robinson, Sarah, Castorina, Giulia, Sánchez-Corrales, Yara E., Sablowski, Robert, Chan, Jordi, Grieneisen, Verônica, Marée, Athanasius

Journal:

Year:

2018

Language:

english

File:

PDF, 8.63 MB

english, 2018

31

Systems Biology Approach Pinpoints Minimum Requirements for Auxin Distribution during Fruit Opening

Li, Xin-Ran, Vroomans, Renske M.A., Fox, Samantha, Grieneisen, Verônica A., Østergaard, Lars, Marée, Athanasius F.M.

Journal:

Molecular Plant

Year:

2019

Language:

english

File:

PDF, 4.86 MB

english, 2019

32

Systems Biology Approach Pinpoints Minimum Requirements for Auxin Distribution during Fruit Opening

Li, Xin-Ran, Vroomans, Renske M.A., Fox, Samantha, Grieneisen, Verônica A., Østergaard, Lars, Marée, Athanasius F.M.

Journal:

Molecular Plant

Year:

2019

File:

PDF, 4.86 MB

2019

33

Shaping of a three-dimensional carnivorous trap through modulation of a planar growth mechanism

Lee, Karen J. I., Bushell, Claire, Koide, Yohei, Fozard, John A., Piao, Chunlan, Yu, Man, Newman, Jacob, Whitewoods, Christopher, Avondo, Jerome, Kennaway, Richard, Marée, Athanasius F. M., Cui, Minlo

Journal:

Year:

2019

Language:

english

File:

PDF, 8.26 MB

english, 2019

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